Configure Inputs
Reference Assembly
GCF_000928555.1GTF Files
Genes and Gene Predictions
No gene models found.Paired-End Sequencing Data
Workflow
Single-Cell RNA-seq Preprocessing: 10X Genomics v3 to Seurat and Scanpy Compatible Format
Description
Complete preprocessing pipeline for 10X Genomics v3 single-cell RNA-seq data. Aligns raw FASTQ files using STARsolo, performs cell calling and quality filtering with DropletUtils, and formats outputs for seamless import into Seurat/Scanpy (Read10X function).
Strain
A/Shanghai/02/2013
Accession
GCF_000928555.1
Priority Pathogen
Avian Influenza